Workshop 01 BIDM

1st International Workshop on Biological Data Management

 

Wednesday, September 3, 2003

 

10.30 - 12.30 Session 1

 

A Study of Multi-Ring Buffer Management for BLAST 

Melissa Lemos, Sergio Lifschitz

 

An algorithm for Generating Representative Functional Annotations Based on Gene Ontology

In-Yee Lee, Jan-Ming Ho, Wen-Chang Lin

 

Bionotes: A System for Biosequence Annotation

Melissa Lemos, Luiz Fernando Bessa Seibel, Marco Antonio Casanova

 

ConstDiff: Identification of Conserved Differences Between Sets of Amino Acid Sequences Saumil Mehta, Deedayal Dinakarpandian

 

12:30 14:00 Lunch

 

14.00 - 15.30 Session 2

 

Microarray Gene Expression Data Association Rules Mining Based on JXR-Tree

Xiang-Rong Jiang, Le Gruenwald

 

Efficient Mining from Heterogeneous Data Sets for Predicting Protein-Protein Interactions Hiroshi Mamitsuka

 

Having a BLAST: Analyzing Gene Sequence Data with BlastQuest

Willian Farmerie, Joachim Hammer, Li Liu, Markus Scheider

 

15.30 16.00 Coffee Break

 

16.00 - 18.00 Session 3

 

Structural Genomic Workflows Supported by Web Services

Maria Claudia Cavalcanti, Fernanda Baiao, Shaila Rossie, Paulo Bisch, Rafaeil Targino, Paulo Pires, Maria Campos, Marta Mattoso

 

Graphical  User Interface for Multiple Biological Databases

Parimala N.

 

Automatic Generation of Composite Wrappers for Semistructured Biological Data Based on Table Structure Identification

Liangyou Chen, Hasan Jamil, Nan Wang