Workshop 6 - BIDM '04

2nd International Workshop on Biological Data Management

 

Wednesday, September 1, 2004

 

Session 1 - 11:30 - 13:35

 

11:30 - 11:55

Developing a Database for Proteomic Analysis of Extracytosolic Plant Proteins

Yang Wang, Osmar R. Zaiane, Randy Goebel, Jennafer L. Southron, Urmila Basu, Randy M. Whittal, Julie L. Stephens, Gregory J. Taylor; Canada

 

11:55 - 12:10 Discussion

 

12:15 - 12:40

Searching Evaluation Paths to Express Scientific Queries

Zo Lacroix, Tiffany Morris, Louiqa Raschid, Maria-Esther Vidal; USA

 

12:55 - 13:20

Exploiting Agent and Database Technologies for Biological Data Collection

Hasan Davulcu, Zoe Lacroix, K Parekh, I Ramakrishnan, N Julasana; USA

 

13:20 - 13:35  Discussion

 

13.:35 15:00 Lunch

 

Session 2 - 15:00 - 16:30

 

15:00 - 15:25 

BioMap: Gene Family based Integration of Heterogenous Biological Databases using AutoMed Metadata.

Michael Maibaum, Galia Rimon, C Orengo, N Martin, A Poulovassilis; UK

 

15:25 - 15:40 Discussion

 

15:45 - 16:10

Integrating brain data spatially: spatial data infrastructure and atlas environment for online federation and analysis of brain images

Illya Zaslavsky, Haiyun He, Joshua Tran, Maryann E. Martone, Amarnath Gupta; USA

 

16:10 - 16:30 Discussion

 

16:30 17:00 Coffee Break

 

Session 3 - 17:00 - 18:30

 

17:00 - 17:25

An Efficient Optimal Leaf Ordering for Hierarchical Clustering in Microarray Gene Expression Data Analysis

Jianteng Zhang, Le Gruenwald; USA

 

17:25 - 17:40  Discussion

 

17:45 - 18:10 

A Data Mining Approach to PubMed Query Refinement

Margherita Berardi, Michele Lapi, Pietro Leo, Donato Malerba; Italy

 

18:10 - 18:30

Discussion & Concluding Remarks